Basic Information
Locus ID:
Tel6E01G517400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
BEST Arabidopsis thaliana protein match is Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 440407695 | 440409873 | - | Tel6E01G517400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.02 | 23,552.71 Da | 30.03 | 78.00 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 98 | 192 | 3.92E-7 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 81 | 199 | 1.4E-6 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044376413.1 | uncharacterized protein LOC123098481 isoform X2 [Triticum aestivum] | 0 |
| TrEMBL | A0A3B6FW65 | TF-B3 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH01.1546, BH02.1349 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0245280.1 |
| Poaceae | Thinopyrum elongatum | 34 | Tel1E01G099300, Tel1E01G144300, Tel1E01G372700 ... |
| Poaceae | Triticum dicoccoides | 10 | gene_TRIDC1AG019590, gene_TRIDC1AG026440 ... |
| Poaceae | Triticum aestivum | 31 | TraesCS1A02G172200.1, TraesCS1A02G173300.1 ... |