Basic Information
Locus ID:
Tel6E01G495000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Anaphase-promoting complex subunit 4 WD40 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 422078759 | 422080871 | + | Tel6E01G495000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 48,703.13 Da | 44.32 | 75.54 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 272 | 307 | 1.7E-6 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 191 | 249 | 1.1E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 323 | 361 | 0.0067 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 166 | 425 | 5.86E-52 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 100 | 432 | 6.2E-112 | IPR015943 |
| SMART | SM00320 | WD40_4 | 268 | 307 | 7.7E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 319 | 361 | 0.0029 | IPR001680 |
| SMART | SM00320 | WD40_4 | 184 | 223 | 4.7E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 364 | 404 | 290.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 226 | 264 | 1.4 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 275 | 309 | 11.681953 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 275 | 316 | 14.685726 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 191 | 232 | 12.112524 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 191 | 228 | 8.887423 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 294 | 308 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_037447910.1 | cell division cycle 20.2, cofactor of APC complex-like [Triticum dicoccoides] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453PCE5 | ANAPC4_WD40 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology