HalophFGD

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Basic Information
Locus ID: Tel6E01G474200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 398689028 398690486 + Tel6E01G474200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.19 38,564.42 Da 50.83 87.98 0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 268 312 9.1E-6 IPR005174
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044420310.1 uncharacterized protein LOC123145067 [Triticum aestivum] 0
TrEMBL A0A453P926 DUF295 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Cocos nucifera 1 COCNU_09G005530
Arecaceae Phoenix dactylifera 2 gene-LOC103697832, gene-LOC120110584
Asparagaceae Asparagus officinalis 1 AsparagusV1_03.542.V1.1
Plantaginaceae Plantago ovata 2 Pov_00001661, Pov_00025652
Poaceae Echinochloa crus-galli 16 AH02.3082, AH02.935, AH04.571, AH05.2135, AH06.2064 ...
AH07.2957, AH07.2958, AH08.551, BH02.1190, BH05.2269, BH07.2774, BH08.324, CH02.1313, CH05.2348, CH07.2851, CH07.2852
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2AG0140480, gene-QOZ80_2BG0196120 ...
gene-QOZ80_5AG0370460, gene-QOZ80_5AG0370470, gene-QOZ80_5BG0418000, gene-QOZ80_8AG0620220, gene-QOZ80_8BG0647890
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0073170.1.CDS1 ...
HORVU.MOREX.r3.6HG0603060.1.CDS1, HORVU.MOREX.r3.7HG0657630.1.CDS1
Poaceae Lolium multiflorum 1 gene-QYE76_014340
Poaceae Oryza coarctata 6 Oco03G017820, Oco03G017830, Oco04G018610, Oco15G003770 ...
Oco16G003680, Oco20G001190
Poaceae Oryza sativa 3 LOC_Os02g44990.1, LOC_Os02g45000.1, LOC_Os08g09360.1
Poaceae Paspalum vaginatum 2 gene-BS78_03G109100, gene-BS78_04G227100
Poaceae Puccinellia tenuiflora 2 Pt_Chr0504721, Pt_Chr0504723
Poaceae Sporobolus alterniflorus 2 Chr09G023810, Chr20G012540
Poaceae Thinopyrum elongatum 2 Tel1E01G464900, Tel6E01G474200
Poaceae Triticum dicoccoides 2 gene_TRIDC6AG039140, gene_TRIDC6BG045940
Poaceae Triticum aestivum 13 TraesCS1A02G286700.1.cds1, TraesCS1A02G286800.1.cds1 ...
TraesCS1B02G296100.1.cds1, TraesCS1B02G296200.1.cds1, TraesCS1D02G285600.1.cds1, TraesCS1D02G285700.1.cds1, TraesCS3D02G518500.1.cds1, TraesCS5B02G258500.1.cds1, TraesCS5D02G267400.1, TraesCS6A02G254200.1.cds1, TraesCS6B02G271400.1.cds1, TraesCS6D02G235600.1.cds1, TraesCS7A02G140700.1.cds1
Poaceae Zea mays 11 Zm00001eb171270_P001, Zm00001eb187050_P001 ...
Zm00001eb250220_P001, Zm00001eb376210_P001, Zm00001eb376240_P001, Zm00001eb376280_P001, Zm00001eb376340_P001, Zm00001eb376360_P001, Zm00001eb376920_P001, Zm00001eb376950_P001, Zm00001eb376960_P001
Poaceae Zoysia japonica 3 nbis-gene-14155, nbis-gene-38900, nbis-gene-9200
Poaceae Zoysia macrostachya 1 Zma_g14100
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-3900
Rhizophoraceae Ceriops tagal 1 nbisL1-mrna-2988
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.