Basic Information
Locus ID:
Tel6E01G461500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Modified RING finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 385466857 | 385471360 | - | Tel6E01G461500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 101,523.60 Da | 49.00 | 78.16 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 832 | 873 | 2.14328E-23 | - |
| CDD | cd01989 | STK_N | 50 | 204 | 8.81478E-44 | - |
| Pfam | PF04564 | U-box domain | 829 | 899 | 2.6E-17 | IPR003613 |
| Pfam | PF00582 | Universal stress protein family | 50 | 169 | 3.9E-5 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 538 | 769 | 3.0E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 510 | 793 | 5.53E-67 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 821 | 902 | 2.12E-23 | - |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 48 | 168 | 1.26E-10 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 43 | 169 | 2.8E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 513 | 607 | 6.7E-27 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 827 | 904 | 3.4E-27 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 608 | 807 | 1.7E-49 | - |
| SMART | SM00504 | Ubox_2 | 831 | 894 | 7.9E-27 | IPR003613 |
| SMART | SM00220 | serkin_6 | 535 | 804 | 5.3E-31 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 827 | 901 | 32.315105 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 535 | 804 | 36.583752 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 653 | 665 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 541 | 562 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 286 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 337 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 351 | - | - |
| Coils | Coil | Coil | 417 | 510 | - | - |
| Coils | Coil | Coil | 365 | 385 | - | - |
| Coils | Coil | Coil | 389 | 409 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_044420226.1 | U-box domain-containing protein 33-like isoform X1 [Triticum aestivum] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A453P7Y1 | RING-type E3 ubiquitin transferase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology