Basic Information
Locus ID:
Tel6E01G429700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 354215614 | 354216276 | + | Tel6E01G429700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 24,417.80 Da | 32.30 | 101.45 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 3 | 54 | 6.6E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 163 | 218 | 2.7E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 136 | 219 | 1.21E-15 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 79 | 4.18E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 123 | 220 | 4.5E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 99 | 7.8E-27 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 159 | 220 | 11.340428 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 165 | 188 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 20 | 33 | 8.0E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 41 | 54 | 8.0E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.5 | - | 0 |
| RefSeq | XP_047082030.1 | putative receptor-like protein kinase At3g47110 [Lolium rigidum] | 0 |
| O81291 | L-type lectin-domain containing receptor kinase IV.4 OS=Arabidopsis thaliana OX=3702 GN=LECRK44 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6PP17 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G429700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1BG066380, gene_TRIDC6BG048640 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13892 |