Basic Information
Locus ID:
Tel6E01G426300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 350781037 | 350787869 | - | Tel6E01G426300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 113,149.93 Da | 52.52 | 58.81 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 296 | 453 | 5.76E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 800 | 847 | 1.81E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 799 | 848 | 3.1E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1005 | 1023 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 751 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 546 | 560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 856 | 902 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 798 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 924 | 984 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 923 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 856 | 1042 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 773 | 798 | - | - |
| Coils | Coil | Coil | 1005 | 1025 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_044403572.1 | uncharacterized protein LOC123127794 isoform X1 [Triticum aestivum] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NRC0 | Tudor domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology