Basic Information
Locus ID:
Tel6E01G368300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Domain of unknown function (DUF4283)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 233213089 | 233216599 | + | Tel6E01G368300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 72,631.57 Da | 44.07 | 80.69 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18787 | SF2_C_DEAD | 508 | 636 | 1.09101E-31 | - |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 521 | 624 | 2.2E-11 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 406 | 644 | 8.57E-32 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 325 | 459 | 1.3E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 501 | 666 | 3.2E-32 | IPR027417 |
| SMART | SM00490 | helicmild6 | 548 | 623 | 1.8E-4 | IPR001650 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 507 | 666 | 14.029366 | IPR001650 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 208 | 242 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 152 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.1 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_044419466.1 | uncharacterized protein LOC123144405 [Triticum aestivum] | 0 |
| P41382 | Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453NS46 | DUF4283 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology