Basic Information
Locus ID:
Tel6E01G363400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 227575765 | 227579147 | - | Tel6E01G363400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 47,373.65 Da | 45.53 | 80.86 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 28 | 65 | 1.7E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 27 | 82 | 8.5E-16 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 14 | 112 | 6.3E-10 | - |
| SMART | SM00256 | fbox_2 | 29 | 69 | 5.5E-9 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 139 | 348 | 9.1E-17 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 23 | 68 | 10.053852 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 6 | 24 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G47790.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_020174450.3 | putative F-box/kelch-repeat protein At1g12870 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9SS35 | Putative F-box protein At3g10240 OS=Arabidopsis thaliana OX=3702 GN=At3g10240 PE=4 SV=1 | 0 | |
| TrEMBL | R7WD73 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology