Basic Information
Locus ID:
Tel6E01G360300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
EBF1
Description:
Leucine-rich repeat - CC (cysteine-containing) subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 225302460 | 225305243 | + | Tel6E01G360300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 67,953.37 Da | 43.78 | 103.71 | 0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 515 | 534 | 1.1 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 565 | 587 | 0.53 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 221 | 244 | 9.0E-4 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 345 | 586 | 3.14E-34 | - |
| SUPERFAMILY | SSF52075 | Outer arm dynein light chain 1 | 558 | 633 | 1.18E-5 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 57 | 102 | 1.83E-6 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 146 | 412 | 8.04E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 60 | 298 | 2.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 452 | 1.7E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 453 | 648 | 1.7E-33 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 485 | 510 | 0.063 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 379 | 404 | 0.0076 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 539 | 564 | 2.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 459 | 484 | 30.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 512 | 537 | 0.029 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 591 | 616 | 130.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 353 | 378 | 100.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 247 | 272 | 0.047 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 565 | 589 | 0.042 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 195 | 220 | 6.3 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 273 | 298 | 0.15 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 221 | 246 | 1.3E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 166 | 194 | 210.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_037452414.1 | EIN3-binding F-box protein 1-like [Triticum dicoccoides] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453NQP4 | F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology