Basic Information
Locus ID:
Tel6E01G350300
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Galactose oxidase, central domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 207936419 | 207937537 | + | Tel6E01G350300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 39,205.93 Da | 48.56 | 80.19 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 126 | 161 | 1.7E-6 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 164 | 209 | 4.1E-8 | IPR006652 |
| Pfam | PF00646 | F-box domain | 5 | 36 | 1.4E-5 | IPR001810 |
| SUPERFAMILY | SSF117281 | Kelch motif | 85 | 328 | 3.79E-36 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 47 | 4.71E-6 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 69 | 344 | 5.5E-36 | IPR015915 |
| SMART | SM00612 | kelc_smart | 126 | 174 | 7.7E-7 | IPR006652 |
| SMART | SM00256 | fbox_2 | 8 | 48 | 0.0086 | IPR001810 |
| SMART | SM00612 | kelc_smart | 176 | 230 | 0.11 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_037452330.1 | F-box/kelch-repeat protein At1g80440-like [Triticum dicoccoides] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PKA5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology