Basic Information
Locus ID:
Tel6E01G346800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 205040414 | 205045948 | + | Tel6E01G346800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 80,737.29 Da | 40.12 | 91.73 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 37 | 334 | 7.44379E-147 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 355 | 652 | 2.93754E-159 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 360 | 648 | 1.3E-23 | IPR030395 |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 44 | 328 | 1.2E-5 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 36 | 333 | 9.68E-43 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 353 | 652 | 1.44E-42 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 353 | 653 | 7.9E-46 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 36 | 334 | 1.8E-36 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 355 | 653 | 26.964481 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 37 | 335 | 27.126883 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 709 | 728 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58170.1 | SHV3-like 5. | 0 |
| RefSeq | XP_037453072.1 | glycerophosphodiester phosphodiesterase GDPDL7-like [Triticum dicoccoides] | 0 |
| Q9LVN0 | Glycerophosphodiester phosphodiesterase GDPDL7 OS=Arabidopsis thaliana OX=3702 GN=GDPDL7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6PKM5 | glycerophosphodiester phosphodiesterase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology