Basic Information
Locus ID:
Tel6E01G327400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 182066749 | 182069952 | - | Tel6E01G327400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.95 | 44,612.83 Da | 51.42 | 89.12 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 11 | 50 | 1.0E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 77 | 1.18E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 8 | 62 | 7.5E-7 | - |
| SMART | SM00256 | fbox_2 | 12 | 52 | 5.3E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 102 | 302 | 7.2E-22 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 385 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18160.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_037446642.1 | putative F-box protein At1g32420 [Triticum dicoccoides] | 0 |
| Q9FK54 | F-box protein At5g18160 OS=Arabidopsis thaliana OX=3702 GN=At5g18160 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6NPM9 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC120105565, gene-LOC120106338 |
| Poaceae | Echinochloa crus-galli | 1 | BH07.864 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0105240, gene-QOZ80_2BG0158700 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0572400.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_021370 |
| Poaceae | Oryza coarctata | 2 | Oco03G004720, Oco04G005180 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g10600.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G076200 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G327400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG022960, gene_TRIDC6BG028380 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G162200.1.cds1, TraesCS6B02G189200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb205830_P002 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12395 |