HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel6E01G314600
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Helix-loop-helix DNA-binding domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 172579897 172583371 - Tel6E01G314600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.02 47,174.81 Da 48.13 68.53 -0.49
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 66 99 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048554197.1 transcription factor bHLH81-like [Triticum urartu] 0
TrEMBL M7YZY3 Uncharacterized protein OS=Triticum urartu OX=4572 GN=TRIUR3_21811 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Thinopyrum elongatum 2 Tel6E01G314600, Tel7E01G280700
Poaceae Triticum dicoccoides 4 gene_TRIDC2BG038160, gene_TRIDC3BG033240 ...
gene_TRIDC3BG062910, gene_TRIDC5BG052450
Poaceae Triticum aestivum 3 TraesCS2A02G227800.1, TraesCS5A02G535200.1 ...
TraesCS5B02G328700.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.