Basic Information
Locus ID:
Tel6E01G305700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Ubiquitin fusion degradation protein UFD1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 164770015 | 164774009 | - | Tel6E01G305700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 35,077.22 Da | 53.16 | 61.33 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 15 | 186 | 1.9E-79 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 111 | 184 | 8.2E-35 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 8 | 109 | 6.2E-43 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 307 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_044418994.1 | ubiquitin fusion degradation protein 1 homolog [Triticum aestivum] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | W0G6H6 | Ubiquitin fusion degradation protein OS=Triticum aestivum OX=4565 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology