Basic Information
Locus ID:
Tel6E01G237100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 121509953 | 121511008 | + | Tel6E01G237100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 39,752.19 Da | 36.77 | 93.56 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 15 | 140 | 2.71544E-20 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 172 | 283 | 1.0E-18 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 282 | 1.19E-25 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 15 | 144 | 9.65E-25 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 14 | 143 | 3.1E-23 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 156 | 279 | 6.5E-32 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 284 | 350 | 4.3E-15 | - |
| SMART | SM00225 | BTB_4 | 179 | 285 | 9.7E-18 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 14 | 139 | 17.987408 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 179 | 241 | 14.997496 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_044409114.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6PJK8 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0556170.1.CDS1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_020182, gene-QYE76_020183, gene-QYE76_020189 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0201546, Pt_Chr0201547, Pt_Chr0201550, Pt_Chr0201587 |
| Poaceae | Thinopyrum elongatum | 6 | Tel6E01G236300, Tel6E01G236400, Tel6E01G236500 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG013620, gene_TRIDC6AG013660 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS6A02G105200.1.cds1, TraesCS6A02G105500.1.cds1 ... |