Basic Information
Locus ID:
Tel6E01G236400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 121283858 | 121284961 | - | Tel6E01G236400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 41,090.49 Da | 42.13 | 87.71 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 14 | 139 | 8.77164E-22 | IPR002083 |
| Pfam | PF00917 | MATH domain | 24 | 140 | 4.9E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 169 | 281 | 7.4E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 14 | 141 | 3.92E-24 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 159 | 280 | 5.49E-27 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 13 | 141 | 4.5E-23 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 282 | 358 | 7.0E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 153 | 277 | 6.4E-34 | IPR011333 |
| SMART | SM00225 | BTB_4 | 177 | 283 | 3.3E-21 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 13 | 138 | 17.424881 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 177 | 245 | 15.948867 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_044416309.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum aestivum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | R7W3C6 | Speckle-type POZ protein-like protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0556170.1.CDS1 |
| Poaceae | Lolium multiflorum | 8 | gene-QYE76_020182, gene-QYE76_020183, gene-QYE76_020189 ... |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0201546, Pt_Chr0201547, Pt_Chr0201550, Pt_Chr0201587 |
| Poaceae | Thinopyrum elongatum | 6 | Tel6E01G236300, Tel6E01G236400, Tel6E01G236500 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC6AG013620, gene_TRIDC6AG013660 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS6A02G105200.1.cds1, TraesCS6A02G105500.1.cds1 ... |