HalophFGD

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Basic Information
Locus ID: Tel6E01G197900
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Protein of unknown function, DUF573
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 100363358 100364340 - Tel6E01G197900
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.51 28,483.83 Da 69.71 72.83 -0.97
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF04504 Protein of unknown function, DUF573 58 147 7.0E-15 IPR007592
MobiDBLite mobidb-lite consensus disorder prediction 232 251 - -
MobiDBLite mobidb-lite consensus disorder prediction 234 251 - -
MobiDBLite mobidb-lite consensus disorder prediction 47 61 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 61 - -
MobiDBLite mobidb-lite consensus disorder prediction 12 30 - -
Gene Ontology
Biological Process:
GO:0006355 (regulation of DNA-templated transcription)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048574361.1 probable transcription factor At1g44810 [Triticum urartu] 0
TrEMBL M8BY24 Mediator of RNA polymerase II transcription subunit 15a OS=Aegilops tauschii OX=37682 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Brassicaceae Brassica nigra 1 BniB06g054100.2N
Poaceae Echinochloa crus-galli 9 AH07.3635, AH09.45, BH02.2324, BH07.3445, BH09.87, CH02.2490 ...
CH06.1643, CH07.3515, CH09.102
Poaceae Eleusine coracana subsp. coracana 9 gene-QOZ80_4AG0327540, gene-QOZ80_4AG0327810 ...
gene-QOZ80_4AG0327920, gene-QOZ80_4AG0328150, gene-QOZ80_4BG0359970, gene-QOZ80_4BG0360250, gene-QOZ80_9AG0675040, gene-QOZ80_9AG0679020, gene-QOZ80_9BG0698830
Poaceae Hordeum vulgare 7 HORVU.MOREX.r3.3HG0225780.1.CDS1 ...
HORVU.MOREX.r3.5HG0485830.1.CDS1, HORVU.MOREX.r3.6HG0561820.1.CDS1, HORVU.MOREX.r3.6HG0561940.1.CDS1, HORVU.MOREX.r3.6HG0563210.2, HORVU.MOREX.r3.6HG0618690.1.CDS1, HORVU.MOREX.r3.7HG0668950.1.CDS1
Poaceae Lolium multiflorum 10 gene-QYE76_016834, gene-QYE76_025728, gene-QYE76_043286 ...
gene-QYE76_048176, gene-QYE76_048894, gene-QYE76_049010, gene-QYE76_051877, gene-QYE76_051900, gene-QYE76_052100, gene-QYE76_052308
Poaceae Oryza coarctata 7 Oco03G022930, Oco04G023540, Oco12G009120, Oco17G000030 ...
Oco17G000090, Oco17G000550, Oco18G000160
Poaceae Oryza sativa 5 LOC_Os01g32890.1, LOC_Os02g53150.1, LOC_Os06g30250.1 ...
LOC_Os09g01140.1, LOC_Os09g03990.1
Poaceae Paspalum vaginatum 5 gene-BS78_04G029000, gene-BS78_04G290500 ...
gene-BS78_06G000700, gene-BS78_06G000800, gene-BS78_10G273800
Poaceae Puccinellia tenuiflora 8 Pt_Chr0102370, Pt_Chr0102404, Pt_Chr0102922, Pt_Chr0203108 ...
Pt_Chr0603323, Pt_Chr0603456, Pt_Chr0603490, Pt_Chr0705147
Poaceae Sporobolus alterniflorus 10 Chr01G023370, Chr03G009260, Chr09G006860, Chr09G007530 ...
Chr09G018620, Chr10G002720, Chr11G016080, Chr13G003020, Chr13G016490, Chr19G010690
Poaceae Thinopyrum elongatum 3 Tel5E01G039900, Tel6E01G197900, Tel7E01G366400
Poaceae Triticum dicoccoides 5 gene_TRIDC3BG016780, gene_TRIDC6AG048840 ...
gene_TRIDC6BG057130, gene_TRIDC7AG025300, gene_TRIDC7BG015530
Poaceae Triticum aestivum 13 TraesCS1B02G087500.1.cds1, TraesCS3A02G036700.1.cds1 ...
TraesCS3B02G047200.1.cds1, TraesCS3B02G119900.1.cds1, TraesCS3D02G043400.1.cds1, TraesCS5D02G022400.1, TraesCS5D02G022900.1, TraesCS6A02G326000.1.cds1, TraesCS6B02G356300.1.cds1, TraesCS6D02G305700.1, TraesCS7A02G199000.1.cds1, TraesCS7B02G105700.1.cds1, TraesCS7D02G201700.1.cds1
Poaceae Zea mays 12 Zm00001eb064430_P001, Zm00001eb149210_P001 ...
Zm00001eb190050_P001, Zm00001eb213510_P001, Zm00001eb213600_P002, Zm00001eb256290_P001, Zm00001eb264080_P002, Zm00001eb264130_P002, Zm00001eb264150_P001, Zm00001eb367480_P001, Zm00001eb390570_P001, Zm00001eb418630_P001
Poaceae Zoysia japonica 6 nbis-gene-19141, nbis-gene-28818, nbis-gene-40062 ...
nbis-gene-41896, nbis-gene-46489, nbis-gene-46514
Poaceae Zoysia macrostachya 5 Zma_g17240, Zma_g26654, Zma_g26665, Zma_g29668, Zma_g8001
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.