Basic Information
Locus ID:
Tel6E01G187800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
FBD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 95430170 | 95431858 | - | Tel6E01G187800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.94 | 54,051.03 Da | 45.48 | 104.01 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 40 | 75 | 2.6E-4 | IPR001810 |
| Pfam | PF08387 | FBD | 389 | 430 | 3.7E-7 | IPR006566 |
| SUPERFAMILY | SSF52047 | RNI-like | 142 | 270 | 8.63E-6 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 32 | 76 | 2.09E-9 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 119 | 368 | 2.5E-6 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 37 | 73 | 8.914593 | IPR001810 |
| Coils | Coil | Coil | 493 | 494 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26922.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_044418343.1 | F-box/FBD/LRR-repeat protein At1g13570-like [Triticum aestivum] | 0 |
| Q9LJF8 | F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana OX=3702 GN=At3g26922 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6QCF6 | FBD domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0157570.1 |
| Poaceae | Lolium multiflorum | 5 | gene-QYE76_046405, gene-QYE76_047771, gene-QYE76_053565 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0200958, Pt_Chr0301212 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G187800 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC6AG004620, gene_TRIDC6AG010050 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS6A02G038800.2, TraesCS6A02G082700.1 ... |