Basic Information
Locus ID:
Tel6E01G183600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 93458035 | 93465723 | - | Tel6E01G183600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 86,690.72 Da | 51.49 | 91.78 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18052 | Rx N-terminal domain | 86 | 148 | 2.6E-7 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 264 | 498 | 3.2E-38 | IPR002182 |
| SUPERFAMILY | SSF52058 | L domain-like | 570 | 730 | 5.1E-16 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 205 | 512 | 7.5E-58 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 497 | 581 | 1.6E-12 | IPR036388 |
| Gene3D | G3DSA:3.40.50.300 | - | 203 | 408 | 2.7E-30 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 642 | 741 | 6.7E-15 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 78 | 183 | 1.4E-6 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 413 | 496 | 1.7E-8 | IPR042197 |
| PRINTS | PR00364 | Disease resistance protein signature | 449 | 463 | 1.3E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 671 | 687 | 1.3E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 348 | 362 | 1.3E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 277 | 292 | 1.3E-15 | - |
| Coils | Coil | Coil | 175 | 195 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044411178.1 | disease resistance protein RGA2-like isoform X1 [Triticum aestivum] | 0 |
| Q9LRR4 | Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A453N2T4 | NB-ARC domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30229810 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103700211 |
| Poaceae | Echinochloa crus-galli | 1 | CH07.1044 |
| Poaceae | Hordeum vulgare | 6 | HORVU.MOREX.r3.1HG0005640.1, HORVU.MOREX.r3.5HG0529550.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000489, gene-QYE76_047577 |
| Poaceae | Oryza coarctata | 5 | Oco04G008120, Oco14G016700, Oco23G006660, Oco24G006330 ... |
| Poaceae | Oryza sativa | 10 | LOC_Os02g18000.1, LOC_Os02g18070.1, LOC_Os02g18080.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G121500, gene-BS78_08G073100, gene-BS78_K161200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202529 |
| Poaceae | Thinopyrum elongatum | 22 | Tel1E01G609700, Tel2E01G100400, Tel2E01G1032200 ... |
| Poaceae | Triticum dicoccoides | 30 | gene_TRIDC1AG050140, gene_TRIDC1BG056960 ... |
| Poaceae | Triticum aestivum | 49 | TraesCS1B02G044100.1, TraesCS1B02G044200.3 ... |