Basic Information
Locus ID:
Tel6E01G153100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 76929168 | 76933345 | - | Tel6E01G153100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 79,260.06 Da | 38.46 | 89.22 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 346 | 382 | 7.60849E-5 | - |
| CDD | cd14066 | STKc_IRAK | 461 | 721 | 4.35603E-87 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 40 | 71 | 2.5E-7 | IPR025287 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 456 | 718 | 2.6E-45 | IPR001245 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 346 | 387 | 6.33E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 455 | 723 | 1.28E-68 | IPR011009 |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 302 | 389 | 4.8E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 430 | 529 | 1.4E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 530 | 726 | 4.5E-53 | - |
| SMART | SM00220 | serkin_6 | 455 | 720 | 3.1E-36 | IPR000719 |
| SMART | SM00181 | egf_5 | 291 | 345 | 54.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 349 | 389 | 0.022 | IPR000742 |
| SMART | SM00179 | egfca_6 | 346 | 389 | 2.8E-6 | IPR001881 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 455 | 720 | 37.445927 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 346 | 389 | 10.615522 | IPR000742 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 364 | 375 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 346 | 373 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 461 | 483 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 574 | 586 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21250.1 | cell wall-associated kinase. cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component such as oligogalacturonides. | 0 |
| RefSeq | XP_044954249.1 | wall-associated receptor kinase 1-like [Hordeum vulgare subsp. vulgare] | 0 |
| Q39191 | Wall-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=WAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I6XQS6 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology