HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel6E01G152300
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 76631955 76633106 + Tel6E01G152300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.64 42,877.68 Da 60.05 85.53 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 23 57 1.2E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 23 78 5.63E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 22 58 2.2E-7 -
SMART SM00256 fbox_2 23 63 0.0014 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037450449.1 uncharacterized protein LOC119320476 [Triticum dicoccoides] 0
TrEMBL A0A3B6PES6 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Thinopyrum elongatum 1 Tel6E01G152300
Poaceae Triticum aestivum 1 TraesCS6B02G081000.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.