Basic Information
Locus ID:
Tel6E01G117700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 61261098 | 61264325 | + | Tel6E01G117700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 113,321.66 Da | 34.74 | 98.61 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 790 | 1059 | 1.20061E-89 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 472 | 492 | 0.87 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 785 | 1054 | 3.3E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 202 | 262 | 2.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 201 | 655 | 5.44E-64 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 769 | 1056 | 2.19E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 69 | 247 | 8.42E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 683 | 3.9E-97 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 198 | 299 | 2.2E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 749 | 860 | 3.4E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 197 | 1.7E-23 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 861 | 1066 | 2.3E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 273 | 296 | 9.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 470 | 494 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 605 | 629 | 64.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 129 | 0.53 | IPR003591 |
| SMART | SM00220 | serkin_6 | 784 | 1060 | 1.5E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 225 | 249 | 160.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 784 | 1059 | 38.011284 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 907 | 919 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 790 | 812 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02220.1 | phytosulfokin receptor 1. Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). | 0 |
| RefSeq | XP_044410720.1 | phytosulfokine receptor 1-like [Triticum aestivum] | 0 |
| Q9ZVR7 | Phytosulfokine receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSKR1 PE=1 SV=4 | 0 | |
| TrEMBL | A0A3B6PHH8 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0099290, gene-QOZ80_2BG0152720 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0546030.1.CDS1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_019570, gene-QYE76_019571 |
| Poaceae | Oryza coarctata | 2 | Oco03G000770, Oco04G000710 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g02490.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G012100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0201128 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G117700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG005390, gene_TRIDC6BG007810 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G044700.1.cds1, TraesCS6B02G061000.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb229960_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52092 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12066 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g21260 |