HalophFGD

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Basic Information
Locus ID: Tel6E01G099200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 50657285 50657809 + Tel6E01G099200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.04 19,270.21 Da 39.09 98.62 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 21 90 6.21E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037449768.1 uncharacterized protein LOC119319386 [Triticum dicoccoides] 0
TrEMBL M8A0R5 F-box domain-containing protein OS=Triticum urartu OX=4572 GN=TRIUR3_25192 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH03.3980, BH03.4297, BH03.4300, BH03.4301, BH03.4302 ...
BH03.4303, BH03.4304, BH03.70, BH05.541, CH01.2488, CH05.614, CH07.210, CH07.211
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_3AG0241990, gene-QOZ80_5AG0385880 ...
gene-QOZ80_5BG0433150, gene-QOZ80_7AG0580510, gene-QOZ80_7AG0580530, gene-QOZ80_7AG0580540, gene-QOZ80_7BG0611680, gene-QOZ80_7BG0611690
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0017790.1.CDS1 ...
HORVU.MOREX.r3.1HG0042970.1.CDS1, HORVU.MOREX.r3.6HG0541110.1.CDS1
Poaceae Paspalum vaginatum 3 gene-BS78_02G380500, gene-BS78_04G264700 ...
gene-BS78_04G264800
Poaceae Sporobolus alterniflorus 2 Chr24G014800, Chr28G012140
Poaceae Thinopyrum elongatum 2 Tel6E01G041900, Tel6E01G099200
Poaceae Triticum aestivum 6 TraesCS6A02G008900.1.cds1, TraesCS6A02G011200.1.cds1 ...
TraesCS6D02G013900.1.cds1, TraesCS6D02G032700.1, TraesCS6D02G044100.1, TraesCSU02G161200.1.cds1
Poaceae Zoysia japonica 1 nbis-gene-33189
Poaceae Zoysia macrostachya 1 Zma_g5731
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.