Basic Information
Locus ID:
Tel6E01G077000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
A domain family that is part of the cupin metalloenzyme superfamily.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 40288089 | 40297985 | - | Tel6E01G077000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 158,045.69 Da | 56.28 | 59.69 | -0.98 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02373 | JmjC domain, hydroxylase | 949 | 1056 | 2.4E-14 | IPR003347 |
| SUPERFAMILY | SSF51197 | Clavaminate synthase-like | 554 | 1101 | 1.29E-34 | - |
| Gene3D | G3DSA:2.60.120.650 | Cupin | 543 | 796 | 1.7E-82 | - |
| Gene3D | G3DSA:2.60.120.650 | Cupin | 900 | 1082 | 3.0E-70 | - |
| SMART | SM00558 | cupin_9 | 657 | 1073 | 8.4E-71 | IPR003347 |
| ProSiteProfiles | PS51184 | JmjC domain profile. | 676 | 1073 | 25.965815 | IPR003347 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 183 | 232 | 8.904299 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 901 | 916 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 900 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1145 | 1163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 850 | 881 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1195 | 1214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1368 | 1406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1102 | 1419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1279 | 1330 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1125 | 1144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1226 | 1244 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 389 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 841 | 933 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1102 | 1124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00990.1 | Transcription factor jumonji (jmjC) domain-containing protein. | 0 |
| RefSeq | XP_044407285.1 | lysine-specific demethylase JMJ25-like [Triticum aestivum] | 0 |
| Q8VYB9 | Lysine-specific demethylase JMJ27 OS=Arabidopsis thaliana OX=3702 GN=JMJ27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6NK41 | RING-type domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology