Basic Information
Locus ID:
Tel6E01G067700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 36922137 | 36923234 | + | Tel6E01G067700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 40,347.13 Da | 52.36 | 78.08 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 18 | 120 | 1.49211E-8 | IPR002083 |
| CDD | cd14733 | BACK | 269 | 317 | 1.21366E-8 | - |
| Pfam | PF00651 | BTB/POZ domain | 164 | 266 | 8.3E-25 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 17 | 120 | 2.45E-11 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 164 | 265 | 4.08E-26 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 143 | 268 | 2.0E-30 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 269 | 340 | 2.0E-12 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 11 | 124 | 1.3E-9 | IPR008974 |
| SMART | SM00225 | BTB_4 | 166 | 268 | 1.5E-25 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 166 | 233 | 18.885712 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_020175788.1 | BTB/POZ and MATH domain-containing protein 1-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6Q9C0 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G067700 |
| Poaceae | Triticum aestivum | 1 | TraesCS6D02G025100.1.cds1 |