HalophFGD

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Basic Information
Locus ID: Tel6E01G048200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 26408413 26410908 - Tel6E01G048200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.36 45,394.88 Da 37.43 91.92 -0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 22 70 4.06E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044355660.1 uncharacterized protein LOC123077444 isoform X2 [Triticum aestivum] 0
TrEMBL A0A3B6GSE4 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH07.1321, AH07.1441, BH07.1366, BH07.1368, BH07.1405 ...
BH07.1412, CH07.1116
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_2AG0109700, gene-QOZ80_2AG0110130 ...
gene-QOZ80_2BG0163560, gene-QOZ80_2BG0163600, gene-QOZ80_2BG0163610
Poaceae Hordeum vulgare 8 HORVU.MOREX.r3.3HG0314030.1, HORVU.MOREX.r3.6HG0542260.1 ...
HORVU.MOREX.r3.4HG0387160.1.CDS1, HORVU.MOREX.r3.6HG0542100.1.CDS1, HORVU.MOREX.r3.6HG0553610.1, HORVU.MOREX.r3.6HG0555260.1, HORVU.MOREX.r3.7HG0726220.1, HORVU.MOREX.r3.7HG0740520.1.CDS1
Poaceae Lolium multiflorum 19 gene-QYE76_013410, gene-QYE76_019256, gene-QYE76_020131 ...
gene-QYE76_024738, gene-QYE76_026078, gene-QYE76_026079, gene-QYE76_026081, gene-QYE76_026292, gene-QYE76_026293, gene-QYE76_026294, gene-QYE76_026295, gene-QYE76_034976, gene-QYE76_035321, gene-QYE76_035751, gene-QYE76_036498, gene-QYE76_036499, gene-QYE76_059643, gene-QYE76_063286, gene-QYE76_068969
Poaceae Oryza coarctata 4 Oco03G007890, Oco04G008240, Oco04G008250, Oco04G008270
Poaceae Oryza sativa 2 LOC_Os02g18614.1, LOC_Os02g18720.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G123700, gene-BS78_K094100, gene-BS78_K243000 ...
gene-BS78_K244100
Poaceae Puccinellia tenuiflora 24 Pt_Chr0200702, Pt_Chr0200703, Pt_Chr0200704, Pt_Chr0200706 ...
Pt_Chr0200831, Pt_Chr0203811, Pt_Chr0204699, Pt_Chr0204703, Pt_Chr0204715, Pt_Chr0204716, Pt_Chr0204724, Pt_Chr0204725, Pt_Chr0300307, Pt_Chr0306953, Pt_Chr0307077, Pt_Chr0401444, Pt_Chr0401446, Pt_Chr0404219, Pt_Chr0404221, Pt_Chr0503491, Pt_Chr0505179, Pt_Chr0505426, Pt_Chr0601041, Pt_Chr0704558
Poaceae Sporobolus alterniflorus 3 Chr06G031510, Chr09G000780, Chr15G022780
Poaceae Thinopyrum elongatum 22 Tel1E01G645700, Tel2E01G134600, Tel2E01G148100 ...
Tel3E01G188900, Tel3E01G681600, Tel3E01G723100, Tel3E01G752900, Tel4E01G635600, Tel5E01G568900, Tel6E01G039000, Tel6E01G043500, Tel6E01G044200, Tel6E01G045100, Tel6E01G048200, Tel6E01G071100, Tel6E01G122100, Tel6E01G158400, Tel6E01G167200, Tel6E01G215200, Tel6E01G226200, Tel7E01G465900, Tel7E01G848600
Poaceae Triticum dicoccoides 9 gene_TRIDC1AG057960, gene_TRIDC1BG017590 ...
gene_TRIDC1BG066740, gene_TRIDC3AG064480, gene_TRIDC3BG072760, gene_TRIDC6AG012980, gene_TRIDC6BG003780, gene_TRIDC6BG018120, gene_TRIDC6BG018180
Poaceae Triticum aestivum 62 TraesCS1A02G393700.1, TraesCS1B02G083300.1 ...
TraesCS1B02G423000.1, TraesCS1D02G065900.1, TraesCS1D02G402800.1, TraesCS2A02G058400.1, TraesCS2D02G057400.2, TraesCS3A02G109100.1, TraesCS3A02G428600.1.cds1, TraesCS3A02G456400.1, TraesCS3A02G456500.1, TraesCS3B02G128100.1, TraesCS3B02G466200.1.cds1, TraesCS3B02G496600.2, TraesCS3B02G496700.1, TraesCS3B02G496900.1.cds1, TraesCS3B02G497000.1, TraesCS3B02G497100.1, TraesCS3D02G110900.2, TraesCS3D02G449500.1, TraesCS3D02G449600.1, TraesCS3D02G449700.1.cds1, TraesCS3D02G449800.1, TraesCS4B02G391600.1, TraesCS4B02G392900.1, TraesCS5B02G357900.1, TraesCS5D02G363100.1, TraesCS5D02G363300.1, TraesCS5D02G497500.1, TraesCS6A02G010800.1, TraesCS6A02G023800.1.cds1, TraesCS6A02G023900.1, TraesCS6A02G047800.1, TraesCS6A02G100400.1, TraesCS6B02G017300.1, TraesCS6B02G019500.1.cds1, TraesCS6B02G032500.1, TraesCS6B02G032600.1, TraesCS6B02G032800.1, TraesCS6B02G095400.1, TraesCS6B02G095500.1, TraesCS6B02G120000.1, TraesCS6B02G120300.1, TraesCS6B02G128400.1, TraesCS6B02G128500.1, TraesCS6D02G023200.1, TraesCS6D02G027100.1, TraesCS6D02G027200.1, TraesCS6D02G027300.1, TraesCS6D02G027500.1, TraesCS6D02G044000.1, TraesCS6D02G055300.1, TraesCS6D02G069200.1, TraesCS6D02G080600.1, TraesCS6D02G080900.1, TraesCS7A02G496900.1, TraesCS7B02G400700.1.cds1, TraesCS7B02G481600.2, TraesCS7D02G483700.1, TraesCS7D02G484000.1, TraesCS7D02G484100.1.cds1, TraesCSU02G034900.1
Poaceae Zea mays 1 Zm00001eb236980_P001
Poaceae Zoysia japonica 3 nbis-gene-34074, nbis-gene-34088, nbis-gene-45205
Poaceae Zoysia macrostachya 3 Zma_g12614, Zma_g15308, Zma_g15320
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.