HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel6E01G032200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: ADP binding
Maps and Mapping Data
Chromosome Start End Strand ID
chr6 18953202 18955569 - Tel6E01G032200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.84 62,575.89 Da 49.36 97.31 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00931 NB-ARC domain 143 360 2.3E-30 IPR002182
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 126 396 3.52E-43 IPR027417
Gene3D G3DSA:1.10.10.10 - 377 473 7.0E-8 IPR036388
Gene3D G3DSA:3.40.50.300 - 127 282 5.3E-25 IPR027417
Gene3D G3DSA:1.20.5.4130 - 1 87 5.5E-10 -
Gene3D G3DSA:1.10.8.430 - 294 363 5.9E-7 IPR042197
PRINTS PR00364 Disease resistance protein signature 232 246 1.1E-12 -
PRINTS PR00364 Disease resistance protein signature 160 175 1.1E-12 -
PRINTS PR00364 Disease resistance protein signature 329 343 1.1E-12 -
Gene Ontology
Molecular Function:
GO:0043531 (ADP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G50180.1 NB-ARC domain-containing disease resistance protein. 0
RefSeq XP_044414485.1 disease resistance protein RGA5-like [Triticum aestivum] 0
Swiss-Prot F7J0N2 Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 0
TrEMBL A0A8R7QNH6 NB-ARC domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH04.413, AH07.2371, BH04.1599, CH04.902, CH04.907, CH06.54 ...
Contig522.1
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0399170, gene-QOZ80_6BG0483630
Poaceae Hordeum vulgare 12 HORVU.MOREX.r3.1HG0004380.1, HORVU.MOREX.r3.1HG0004460.1 ...
HORVU.MOREX.r3.4HG0345000.1, HORVU.MOREX.r3.5HG0420450.1, HORVU.MOREX.r3.5HG0502310.1, HORVU.MOREX.r3.5HG0502370.1, HORVU.MOREX.r3.5HG0514590.1, HORVU.MOREX.r3.5HG0526140.1, HORVU.MOREX.r3.5HG0531040.1, HORVU.MOREX.r3.6HG0629550.1, HORVU.MOREX.r3.7HG0657900.1, HORVU.MOREX.r3.7HG0749740.1
Poaceae Lolium multiflorum 7 gene-QYE76_007175, gene-QYE76_007364, gene-QYE76_007535 ...
gene-QYE76_014956, gene-QYE76_060686, gene-QYE76_064268, gene-QYE76_064401
Poaceae Oryza coarctata 5 Oco10G012420, Oco21G003450, Oco21G009900, Oco22G011170 ...
Oco24G004450
Poaceae Oryza sativa 8 LOC_Os05g40150.1, LOC_Os08g30634.1, LOC_Os10g22020.1 ...
LOC_Os11g11810.1, LOC_Os11g11920.1, LOC_Os11g45840.1, LOC_Os11g45970.1, LOC_Os12g18360.1
Poaceae Paspalum vaginatum 5 gene-BS78_02G150400, gene-BS78_05G266500 ...
gene-BS78_05G267000, gene-BS78_05G281800, gene-BS78_08G036000
Poaceae Puccinellia tenuiflora 5 Pt_Chr0500889, Pt_Chr0604637, Pt_Chr0700719, Pt_Chr0701145 ...
Pt_Chr0701453
Poaceae Sporobolus alterniflorus 2 Chr05G008580, Chr31G002610
Poaceae Thinopyrum elongatum 5 Tel4E01G146000, Tel5E01G846900, Tel6E01G032000 ...
Tel6E01G032200, Tel6E01G704900
Poaceae Triticum dicoccoides 16 gene_TRIDC3BG083900, gene_TRIDC4AG035590 ...
gene_TRIDC4AG050170, gene_TRIDC4BG014470, gene_TRIDC5AG050380, gene_TRIDC5AG050390, gene_TRIDC5BG003040, gene_TRIDC5BG054400, gene_TRIDC5BG073560, gene_TRIDC5BG074070, gene_TRIDC5BG075710, gene_TRIDC5BG077670, gene_TRIDC6BG001490, gene_TRIDC6BG005170, gene_TRIDC6BG067560, gene_TRIDC7AG064910
Poaceae Triticum aestivum 28 TraesCS1D02G029000.1, TraesCS1D02G040300.1 ...
TraesCS2A02G564800.1, TraesCS3A02G009300.1.cds1, TraesCS4A02G223400.2, TraesCS4A02G349800.1, TraesCS4B02G093200.2, TraesCS4D02G002400.1, TraesCS4D02G089900.1, TraesCS5A02G344100.1, TraesCS5A02G344300.1, TraesCS5A02G481100.1, TraesCS5B02G020400.1, TraesCS5B02G344100.2, TraesCS5B02G344200.1, TraesCS5B02G491600.1, TraesCS5B02G494300.1, TraesCS5B02G521200.1, TraesCS5D02G349800.2, TraesCS5D02G494600.1, TraesCS5D02G522000.1, TraesCS6B02G013200.1, TraesCS6B02G041800.1, TraesCS6B02G431300.1, TraesCS7A02G464600.1, TraesCS7A02G561200.1, TraesCS7B02G365100.1, TraesCS7D02G452200.1
Poaceae Zea mays 1 Zm00001eb164940_P002
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.