Basic Information
Locus ID:
Tel6E01G005100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 3094906 | 3100049 | - | Tel6E01G005100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 113,750.70 Da | 46.00 | 88.07 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 265 | 363 | 9.6E-15 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 33 | 250 | 1.8E-48 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 597 | 802 | 7.1E-39 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 425 | 490 | 1.5E-6 | IPR041118 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 19 | 265 | 1.22E-65 | IPR011009 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 552 | 837 | 1.25E-60 | IPR027417 |
| SUPERFAMILY | SSF49354 | PapD-like | 247 | 382 | 3.66E-19 | IPR008962 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3 | 104 | 4.3E-25 | - |
| Gene3D | G3DSA:1.10.8.430 | - | 738 | 821 | 7.7E-7 | IPR042197 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 258 | 380 | 3.6E-23 | IPR013783 |
| Gene3D | G3DSA:1.20.5.4130 | - | 407 | 527 | 8.7E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 257 | 4.0E-32 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 551 | 732 | 1.1E-33 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 822 | 900 | 8.9E-12 | IPR036388 |
| SMART | SM00220 | serkin_6 | 32 | 310 | 3.8E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 32 | 305 | 35.792248 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 260 | 377 | 17.531857 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 38 | 60 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 166 | 178 | - | IPR008271 |
| PRINTS | PR00364 | Disease resistance protein signature | 673 | 687 | 9.9E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 600 | 615 | 9.9E-12 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 774 | 788 | 9.9E-12 | - |
| Coils | Coil | Coil | 413 | 440 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_037488003.1 | probable tyrosine-protein kinase DDB_G0283397 [Triticum dicoccoides] | 0 |
| Q7XA39 | Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453MSV9 | NB-ARC domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30229810 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103700211 |
| Poaceae | Echinochloa crus-galli | 1 | CH07.1044 |
| Poaceae | Hordeum vulgare | 6 | HORVU.MOREX.r3.1HG0005640.1, HORVU.MOREX.r3.5HG0529550.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000489, gene-QYE76_047577 |
| Poaceae | Oryza coarctata | 5 | Oco04G008120, Oco14G016700, Oco23G006660, Oco24G006330 ... |
| Poaceae | Oryza sativa | 10 | LOC_Os02g18000.1, LOC_Os02g18070.1, LOC_Os02g18080.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G121500, gene-BS78_08G073100, gene-BS78_K161200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202529 |
| Poaceae | Thinopyrum elongatum | 22 | Tel1E01G609700, Tel2E01G100400, Tel2E01G1032200 ... |
| Poaceae | Triticum dicoccoides | 30 | gene_TRIDC1AG050140, gene_TRIDC1BG056960 ... |
| Poaceae | Triticum aestivum | 49 | TraesCS1B02G044100.1, TraesCS1B02G044200.3 ... |