Basic Information
Locus ID:
Tel5E01G894800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
UBC4
Description:
Ubiquitin-conjugating enzyme E2, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 621803653 | 621806260 | - | Tel5E01G894800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.59 | 25,856.43 Da | 59.75 | 56.12 | -0.94 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 47 | 183 | 2.70647E-48 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 50 | 182 | 8.2E-38 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 44 | 188 | 2.62E-44 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 33 | 200 | 1.7E-47 | IPR016135 |
| SMART | SM00212 | ubc_7 | 44 | 188 | 4.7E-48 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 40 | 188 | 39.243286 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 113 | 129 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 224 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 48 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 211 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63800.1 | ubiquitin-conjugating enzyme 5. | 0 |
| RefSeq | XP_044365387.1 | ubiquitin-conjugating enzyme E2-23 kDa [Triticum aestivum] | 0 |
| P16577 | Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6N1U2 | UBC core domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology