Basic Information
Locus ID:
Tel5E01G867500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 604275611 | 604279284 | + | Tel5E01G867500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.39 | 120,038.25 Da | 34.75 | 106.81 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 805 | 1082 | 5.4E-43 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 536 | 594 | 8.2E-11 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 98 | 156 | 1.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 464 | 523 | 6.0E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 3.5E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 633 | 690 | 8.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 289 | 476 | 3.27E-36 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 326 | 7.94E-63 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 463 | 721 | 2.38E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 778 | 1084 | 3.1E-68 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 429 | 735 | 1.1E-83 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 309 | 1.0E-70 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 874 | 1096 | 9.7E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 310 | 428 | 2.8E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 770 | 873 | 9.4E-21 | - |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 582 | 606 | 6.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 558 | 581 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 630 | 653 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 167 | 7.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 798 | 1087 | 1.0E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 678 | 703 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 110.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 582 | 605 | 89.0 | - |
| SMART | SM00369 | LRR_typ_2 | 654 | 677 | 290.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 534 | 560 | 160.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 143 | 170 | 150.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 462 | 488 | 200.0 | - |
| SMART | SM00369 | LRR_typ_2 | 510 | 544 | 100.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 363 | 389 | 200.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 798 | 1087 | 33.262264 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 918 | 930 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 510 | 523 | 8.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 122 | 135 | 8.3E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47090.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044402593.1 | receptor kinase-like protein Xa21 [Triticum aestivum] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | M8CXA0 | Putative LRR receptor-like serine/threonine-protein kinase OS=Aegilops tauschii OX=37682 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G867500 |
| Poaceae | Triticum aestivum | 1 | TraesCS5D02G556900.1 |