Basic Information
Locus ID:
Tel5E01G853000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
U11 U12 small nuclear ribonucleoprotein 31 kDa
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 599100257 | 599101722 | - | Tel5E01G853000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.17 | 41,952.69 Da | 46.71 | 111.64 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 23 | 59 | 2.0E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 119 | 310 | 2.51E-8 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 84 | 1.1E-13 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 87 | 364 | 5.5E-9 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 20 | 67 | 1.0E-8 | - |
| SMART | SM00256 | fbox_2 | 27 | 68 | 6.1E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 21 | 66 | 10.34529 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02910.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_020183674.1 | F-box/FBD/LRR-repeat protein At5g22700-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LYZ4 | F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6HYT8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology