Basic Information
Locus ID:
Tel5E01G829700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 583901278 | 583914780 | + | Tel5E01G829700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 176,739.81 Da | 46.98 | 91.92 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 615 | 820 | 2.0E-40 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 42 | 312 | 2.6E-49 | IPR000719 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 562 | 855 | 4.0E-58 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 1396 | 1527 | 3.5E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 327 | 6.15E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 911 | 1430 | 1.22E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 929 | 1079 | 5.4E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 110 | 4.3E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1432 | 1543 | 1.8E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 840 | 924 | 1.2E-11 | IPR036388 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 342 | 1.2E-47 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 562 | 751 | 3.5E-32 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1109 | 1431 | 7.2E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 756 | 839 | 1.3E-5 | IPR042197 |
| SMART | SM00220 | serkin_6 | 41 | 318 | 2.3E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 41 | 323 | 35.551968 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 172 | 184 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 47 | 69 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 1339 | 1355 | 7.8E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 691 | 705 | 7.8E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 618 | 633 | 7.8E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 792 | 806 | 7.8E-16 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044391647.1 | putative disease resistance protein RGA1 isoform X1 [Triticum aestivum] | 0 |
| Q7XBQ9 | Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6LY50 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30229810 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103700211 |
| Poaceae | Echinochloa crus-galli | 1 | CH07.1044 |
| Poaceae | Hordeum vulgare | 6 | HORVU.MOREX.r3.1HG0005640.1, HORVU.MOREX.r3.5HG0529550.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000489, gene-QYE76_047577 |
| Poaceae | Oryza coarctata | 5 | Oco04G008120, Oco14G016700, Oco23G006660, Oco24G006330 ... |
| Poaceae | Oryza sativa | 10 | LOC_Os02g18000.1, LOC_Os02g18070.1, LOC_Os02g18080.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G121500, gene-BS78_08G073100, gene-BS78_K161200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202529 |
| Poaceae | Thinopyrum elongatum | 22 | Tel1E01G609700, Tel2E01G100400, Tel2E01G1032200 ... |
| Poaceae | Triticum dicoccoides | 30 | gene_TRIDC1AG050140, gene_TRIDC1BG056960 ... |
| Poaceae | Triticum aestivum | 49 | TraesCS1B02G044100.1, TraesCS1B02G044200.3 ... |