Basic Information
Locus ID:
Tel5E01G829500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 583864462 | 583865368 | + | Tel5E01G829500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 33,817.64 Da | 41.66 | 95.15 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18052 | Rx N-terminal domain | 4 | 57 | 6.5E-8 | IPR041118 |
| Pfam | PF00931 | NB-ARC domain | 174 | 300 | 3.2E-21 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 108 | 300 | 1.27E-24 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 150 | 301 | 1.8E-26 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 1 | 91 | 1.0E-7 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 250 | 264 | 4.2E-7 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 178 | 193 | 4.2E-7 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 169 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044391652.1 | uncharacterized protein LOC123114291 [Triticum aestivum] | 0 |
| Q7XA40 | Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6LXZ2 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30229810 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103700211 |
| Poaceae | Echinochloa crus-galli | 1 | CH07.1044 |
| Poaceae | Hordeum vulgare | 6 | HORVU.MOREX.r3.1HG0005640.1, HORVU.MOREX.r3.5HG0529550.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000489, gene-QYE76_047577 |
| Poaceae | Oryza coarctata | 5 | Oco04G008120, Oco14G016700, Oco23G006660, Oco24G006330 ... |
| Poaceae | Oryza sativa | 10 | LOC_Os02g18000.1, LOC_Os02g18070.1, LOC_Os02g18080.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G121500, gene-BS78_08G073100, gene-BS78_K161200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202529 |
| Poaceae | Thinopyrum elongatum | 22 | Tel1E01G609700, Tel2E01G100400, Tel2E01G1032200 ... |
| Poaceae | Triticum dicoccoides | 30 | gene_TRIDC1AG050140, gene_TRIDC1BG056960 ... |
| Poaceae | Triticum aestivum | 49 | TraesCS1B02G044100.1, TraesCS1B02G044200.3 ... |