Basic Information
Locus ID:
Tel5E01G828800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 583472990 | 583474270 | + | Tel5E01G828800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 46,603.03 Da | 35.81 | 88.59 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 50 | 85 | 1.5E-8 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 252 | 340 | 1.1E-5 | IPR013187 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 93 | 396 | 1.96E-7 | IPR011047 |
| SUPERFAMILY | SSF81383 | F-box domain | 45 | 83 | 1.11E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 49 | 84 | 2.0E-6 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 85 | 374 | 5.7E-8 | IPR015943 |
| SMART | SM00256 | fbox_2 | 50 | 90 | 1.6E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 150 | 342 | 3.2E-16 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 44 | 81 | 8.570165 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10240.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_044394362.1 | putative F-box protein At5g50220 [Triticum aestivum] | 0 |
| Q9SSQ2 | F-box protein At1g52495 OS=Arabidopsis thaliana OX=3702 GN=At1g52495 PE=4 SV=1 | 0 | |
| TrEMBL | A0A3B6LXY5 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology