HalophFGD

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Basic Information
Locus ID: Tel5E01G797000
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 568736024 568739671 + Tel5E01G797000
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.68 131,130.89 Da 43.62 77.16 -0.45
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF04548 AIG1 family 584 712 1.7E-20 IPR006703
Pfam PF11886 Translocase of chloroplast 159/132, membrane anchor domain 942 1205 2.2E-98 IPR024283
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 578 711 9.61E-19 IPR027417
Gene3D G3DSA:3.40.50.300 - 554 804 4.5E-51 IPR027417
TIGRFAM TIGR00993 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains 481 1211 1.0E-257 IPR005690
ProSiteProfiles PS51720 AIG1-type G domain profile. 581 818 25.943895 IPR006703
MobiDBLite mobidb-lite consensus disorder prediction 310 345 - -
MobiDBLite mobidb-lite consensus disorder prediction 833 852 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 81 - -
MobiDBLite mobidb-lite consensus disorder prediction 833 848 - -
MobiDBLite mobidb-lite consensus disorder prediction 99 138 - -
MobiDBLite mobidb-lite consensus disorder prediction 211 423 - -
MobiDBLite mobidb-lite consensus disorder prediction 277 291 - -
MobiDBLite mobidb-lite consensus disorder prediction 384 398 - -
Coils Coil Coil 895 922 - -
Gene Ontology
Biological Process:
GO:0045036 (protein targeting to chloroplast)
Molecular Function:
GO:0003924 (GTPase activity) GO:0005525 (GTP binding)
Cellular Component:
GO:0009707 (chloroplast outer membrane)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G02510.1 translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. 0
RefSeq XP_044400133.1 translocase of chloroplast 101, chloroplastic-like [Triticum aestivum] 0
Swiss-Prot O81283 Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 0
TrEMBL A0A3B6N1Q2 AIG1-type G domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 8 jg12427, jg16082, jg26158, jg30354, jg30355, jg31608 ...
jg31609, jg35194
Aizoaceae Mesembryanthemum crystallinum 3 gene_10598, gene_21886, gene_5203
Amaranthaceae Atriplex hortensis 3 Ah009698, Ah014270, Ah029964
Amaranthaceae Beta vulgaris 3 BVRB_8g193370, BVRB_9g214410, BVRB_9g217720
Amaranthaceae Salicornia bigelovii 8 Sbi_jg12172, Sbi_jg25567, Sbi_jg4322, Sbi_jg4323, Sbi_jg9388 ...
Sbi_jg47118, Sbi_jg49499, Sbi_jg49501
Amaranthaceae Salicornia europaea 4 Seu_jg19225, Seu_jg21401, Seu_jg5745, Seu_jg5746
Amaranthaceae Suaeda aralocaspica 6 GOSA_00011037, GOSA_00020407, GOSA_00021401, GOSA_00021403 ...
GOSA_00021405, GOSA_00026966
Amaranthaceae Suaeda glauca 7 Sgl11266, Sgl11269, Sgl16661, Sgl41934, Sgl46725, Sgl66501 ...
Sgl70832
Amaranthaceae Chenopodium album 7 gene:ENSEOMG00000006293, gene:ENSEOMG00000011617 ...
gene:ENSEOMG00000032061, gene:ENSEOMG00000036078, gene:ENSEOMG00000039062, gene:ENSEOMG00000041578, gene:ENSEOMG00000052020
Amaranthaceae Chenopodium quinoa 6 CQ.Regalona.r1.7AG0013120, CQ.Regalona.r1.7BG0003180 ...
CQ.Regalona.r1.7BG0015050, CQ.Regalona.r1.8AG0022680, CQ.Regalona.r1.8BG0019750, CQ.Regalona.r1.9AG0021410
Anacardiaceae Pistacia vera 4 pistato.v30009290, pistato.v30216830, pistato.v30234480 ...
pistato.v30261650
Apiaceae Apium graveolens 6 Ag11G04036, Ag2G02860, Ag6G02357, Ag6G02358, Ag9G02236 ...
Ag9G02240
Arecaceae Cocos nucifera 4 COCNU_01G016040, COCNU_07G002080, COCNU_10G001490 ...
scaffold001310G000020
Arecaceae Phoenix dactylifera 7 gene-LOC103697442, gene-LOC103706145, gene-LOC103706480 ...
gene-LOC103707491, gene-LOC103713815, gene-LOC120111332, gene-LOC120112134
Asparagaceae Asparagus officinalis 7 AsparagusV1_01.114.V1.1, AsparagusV1_05.1372.V1.1 ...
AsparagusV1_05.3297.V1.1, AsparagusV1_07.994.V1.1, AsparagusV1_07.995.V1.1, AsparagusV1_08.3160.V1.1, AsparagusV1_10.1662.V1.1
Asteraceae Flaveria trinervia 3 Ftri10G32894, Ftri13G06477, Ftri15G15260
Brassicaceae Arabidopsis thaliana 4 AT2G16640.1, AT3G16620.1, AT4G02510.1, AT5G20300.1
Brassicaceae Eutrema salsugineum 5 Thhalv10012730m.g.v1.0, Thhalv10022323m.g.v1.0 ...
Thhalv10022525m.g.v1.0, Thhalv10028361m.g.v1.0, Thhalv10029135m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp3g30110.v2.2, Sp6g02420.v2.2, Sp6g24120.v2.2
Brassicaceae Brassica nigra 3 BniB01g048030.2N, BniB02g042470.2N, BniB08g045120.2N
Casuarinaceae Casuarina equisetifolia 4 Ceq06G0943, Ceq06G1401, Ceq07G1681, Ceq09G1153
Casuarinaceae Casuarina glauca 4 Cgl06G0969, Cgl06G1464, Cgl07G1816, Cgl07G1822
Cymodoceaceae Cymodocea nodosa 4 gene.Cymno01g02010, gene.Cymno02g10800, gene.Cymno02g16850 ...
gene.Cymno04g14410
Dunaliellaceae Dunaliella salina 2 Dusal.0091s00005.v1.0, Dusal.0321s00014.v1.0
Hydrocharitaceae Thalassia testudinum 4 gene.Thate01g02950, gene.Thate01g22120, gene.Thate06g03850 ...
gene.Thate06g24990
Nitrariaceae Nitraria sibirica 4 evm.TU.LG04.335, evm.TU.LG07.602, evm.TU.LG08.282 ...
evm.TU.LG11.1309
Plantaginaceae Plantago ovata 2 Pov_00001596, Pov_00025033
Plumbaginaceae Limonium bicolor 5 Lb1G03807, Lb1G06814, Lb1G06815, Lb3G15588, Lb3G15590
Poaceae Echinochloa crus-galli 10 AH01.3003, AH01.494, AH02.2159, AH05.417, BH01.244, BH05.476 ...
BH02.2238, CH01.3582, CH02.2392, CH05.540
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_2AG0115770, gene-QOZ80_2BG0169640 ...
gene-QOZ80_3AG0209380, gene-QOZ80_3BG0254530, gene-QOZ80_5AG0384840, gene-QOZ80_5AG0404670, gene-QOZ80_5BG0431670, gene-QOZ80_5BG0452780
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.1HG0055730.1
Poaceae Lolium multiflorum 5 gene-QYE76_002680, gene-QYE76_002681, gene-QYE76_009634 ...
gene-QYE76_012485, gene-QYE76_060417
Poaceae Oryza coarctata 8 Oco05G028270, Oco06G029260, Oco09G002540, Oco10G002560 ...
Oco19G009540, Oco20G009440, Oco23G003470, Oco24G003060
Poaceae Oryza sativa 4 LOC_Os03g61890.2, LOC_Os05g05950.1, LOC_Os10g40110.1 ...
LOC_Os12g09570.2
Poaceae Paspalum vaginatum 4 gene-BS78_01G019800, gene-BS78_01G294100 ...
gene-BS78_08G058200, gene-BS78_09G048200
Poaceae Puccinellia tenuiflora 2 Pt_Chr0501973, Pt_Chr0502095
Poaceae Sporobolus alterniflorus 15 Chr01G000910, Chr01G012190, Chr04G023720, Chr06G025700 ...
Chr06G028260, Chr09G004410, Chr12G024460, Chr12G032490, Chr13G020520, Chr15G019510, Chr18G000920, Chr18G007850, Chr19G013330, Chr19G013340, Chr22G015040
Poaceae Thinopyrum elongatum 5 Tel1E01G191600, Tel1E01G357400, Tel3E01G668400 ...
Tel5E01G210600, Tel5E01G797000
Poaceae Triticum dicoccoides 8 gene_TRIDC1AG017150, gene_TRIDC1AG031390 ...
gene_TRIDC1BG017660, gene_TRIDC1BG036840, gene_TRIDC4AG053520, gene_TRIDC5AG017990, gene_TRIDC5BG018210, gene_TRIDC5BG076670
Poaceae Triticum aestivum 12 TraesCS1A02G093900.3, TraesCS1A02G208000.1.cds1 ...
TraesCS1B02G122000.4, TraesCS1B02G222000.1.cds1, TraesCS1D02G102500.3, TraesCS1D02G211300.1.cds1, TraesCS4A02G358400.1, TraesCS5A02G112900.1, TraesCS5B02G109100.1, TraesCS5B02G514000.1.cds1, TraesCS5D02G120200.1, TraesCS5D02G514500.1.cds1
Poaceae Zea mays 7 Zm00001eb022910_P001, Zm00001eb063660_P002 ...
Zm00001eb211170_P001, Zm00001eb264300_P001, Zm00001eb267970_P001, Zm00001eb354100_P001, Zm00001eb391770_P001
Poaceae Zoysia japonica 5 nbis-gene-12240, nbis-gene-15590, nbis-gene-18176 ...
nbis-gene-23427, nbis-gene-36262
Poaceae Zoysia macrostachya 5 Zma_g103, Zma_g12860, Zma_g25608, Zma_g26446, Zma_g27711
Portulacaceae Portulaca oleracea 4 evm.TU.LG01.142, evm.TU.LG02.1855, evm.TU.LG04.612 ...
evm.TU.LG09.86
Posidoniaceae Posidonia oceanica 4 gene.Posoc01g32570, gene.Posoc02g08360, gene.Posoc02g10040 ...
gene.Posoc03g03960
Rhizophoraceae Bruguiera sexangula 6 evm.TU.Scaffold_10_RagTag.82, evm.TU.Scaffold_16_RagTag.412 ...
evm.TU.Scaffold_1_RagTag.2292, evm.TU.Scaffold_2_RagTag.117, evm.TU.Scaffold_4_RagTag.2278, evm.TU.Scaffold_9_RagTag.822
Rhizophoraceae Carallia pectinifolia 5 nbisL1-mrna-12903, nbisL1-mrna-25192, nbisL1-mrna-29718 ...
nbisL1-mrna-29721, nbisL1-mrna-6028
Rhizophoraceae Ceriops tagal 5 nbisL1-mrna-11018, nbisL1-mrna-1129, nbisL1-mrna-19956 ...
nbisL1-mrna-20939, nbisL1-mrna-6619
Rhizophoraceae Ceriops zippeliana 6 nbisL1-mrna-16521, nbisL1-mrna-18475, nbisL1-mrna-20127 ...
nbisL1-mrna-3267, nbisL1-mrna-5016, nbisL1-mrna-9376
Rhizophoraceae Kandelia candel 6 add.evm.TU.utg000003l.214, add.evm.TU.utg000009l.465 ...
add.evm.TU.utg000016l.26, add.evm.TU.utg000022l.147, evm.TU.utg000008l.1331, evm.TU.utg000033l.55
Rhizophoraceae Kandelia obovata 4 Maker00000322, Maker00009899, Maker00014527, Maker00017005
Rhizophoraceae Rhizophora apiculata 5 nbisL1-mrna-17339, nbisL1-mrna-18080, nbisL1-mrna-1852 ...
nbisL1-mrna-18579, nbisL1-mrna-22462
Rhizophoraceae Rhizophora mangle 6 nbisL1-mrna-14484, nbisL1-mrna-21128, nbisL1-mrna-22299 ...
nbisL1-mrna-22433, nbisL1-mrna-5226, nbisL1-mrna-6467
Salicaceae Populus euphratica 9 populus_peu05702, populus_peu08047, populus_peu08085 ...
populus_peu08740, populus_peu11084, populus_peu19222, populus_peu22207, populus_peu36611, populus_peu38093
Solanaceae Lycium barbarum 4 gene-LOC132599297, gene-LOC132603114, gene-LOC132608951 ...
gene-LOC132645058
Solanaceae Solanum chilense 4 SOLCI000141800, SOLCI003627400, SOLCI003917900 ...
SOLCI005746900
Solanaceae Solanum pennellii 4 gene-LOC107006205, gene-LOC107025996, gene-LOC107030552 ...
gene-LOC107032710
Tamaricaceae Reaumuria soongarica 4 STRG.12235_chr02_-, STRG.13001_chr02_-, STRG.20850_chr08_+ ...
gene_6252
Tamaricaceae Tamarix chinensis 4 TC01G0347, TC10G0092, TC10G1190, TC12G0731
Zosteraceae Zostera marina 4 Zosma01g33500.v3.1, Zosma04g10780.v3.1, Zosma06g21550.v3.1 ...
Zosma189g00020.v3.1
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