Basic Information
Locus ID:
Tel5E01G788600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 564694751 | 564700272 | - | Tel5E01G788600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 57,290.60 Da | 43.46 | 87.07 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 94 | 172 | 1.78574E-16 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 218 | 304 | 1.7E-4 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 89 | 186 | 2.9E-17 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 96 | 186 | 5.76E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 84 | 215 | 1.0E-20 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 225 | 328 | 2.1E-7 | - |
| SMART | SM00225 | BTB_4 | 84 | 189 | 3.0E-10 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 84 | 158 | 16.321144 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_044360977.1 | BTB/POZ domain-containing protein POB1-like [Triticum aestivum] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6HZV8 | BTB domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0239050.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_060465 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0101990, Pt_Chr0106000, Pt_Chr0108220, Pt_Chr0601157 |
| Poaceae | Thinopyrum elongatum | 7 | Tel3E01G201600, Tel5E01G788100, Tel5E01G788500 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC3AG014670, gene_TRIDC3AG014680 ... |
| Poaceae | Triticum aestivum | 10 | TraesCS3A02G118000.1, TraesCS3A02G118100.1 ... |