Basic Information
Locus ID:
Tel5E01G788100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 564583772 | 564585872 | + | Tel5E01G788100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 47,818.69 Da | 52.45 | 90.26 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 12 | 84 | 1.64938E-14 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 119 | 217 | 1.2E-5 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 12 | 99 | 2.8E-15 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 13 | 99 | 5.49E-15 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 7 | 139 | 5.8E-20 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 140 | 242 | 5.4E-10 | - |
| SMART | SM00875 | BACK_2 | 114 | 219 | 0.0014 | IPR011705 |
| SMART | SM00225 | BTB_4 | 3 | 101 | 6.5E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1 | 70 | 13.59112 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_040247110.1 | BTB/POZ domain-containing protein At2g46260-like [Aegilops tauschii subsp. strangulata] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A453MCP6 | BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0239050.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_060465 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0101990, Pt_Chr0106000, Pt_Chr0108220, Pt_Chr0601157 |
| Poaceae | Thinopyrum elongatum | 7 | Tel3E01G201600, Tel5E01G788100, Tel5E01G788500 ... |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC3AG014670, gene_TRIDC3AG014680 ... |
| Poaceae | Triticum aestivum | 10 | TraesCS3A02G118000.1, TraesCS3A02G118100.1 ... |