Basic Information
Locus ID:
Tel5E01G780500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 560715692 | 560720853 | - | Tel5E01G780500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 55,492.22 Da | 45.53 | 90.82 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 6 | 45 | 9.3E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 108 | 4.71E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 6 | 47 | 2.1E-5 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 54 | 8.914593 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 499 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048572569.1 | uncharacterized protein LOC125552898 isoform X1 [Triticum urartu] | 0 |
| TrEMBL | A0A3B6LVN9 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0105908, Pt_Chr0105944, Pt_Chr0105950 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G780500 |
| Poaceae | Triticum aestivum | 2 | TraesCS4A02G366900.1, TraesCS5B02G505700.1 |