Basic Information
Locus ID:
Tel5E01G754000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
rRNA N-glycosidase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 547854045 | 547855130 | - | Tel5E01G754000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 39,278.55 Da | 41.28 | 78.17 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 97 | 290 | 3.7E-61 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 94 | 340 | 1.7E-52 | IPR036041 |
| Gene3D | G3DSA:4.10.470.10 | Ricin (A Subunit), domain 2 | 248 | 360 | 1.7E-43 | IPR016139 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 79 | 247 | 2.6E-54 | IPR016138 |
| ProSitePatterns | PS00275 | Shiga/ricin ribosomal inactivating toxins active site signature. | 240 | 256 | - | IPR017988 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 146 | 161 | 3.7E-8 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 99 | 112 | 3.7E-8 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 236 | 256 | 3.7E-8 | IPR017989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 316 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020198337.1 | protein synthesis inhibitor II-like [Aegilops tauschii subsp. strangulata] | 0 |
| P04399 | Protein synthesis inhibitor II OS=Hordeum vulgare OX=4513 GN=RIP30A PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KSX7 | rRNA N-glycosylase OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology