Basic Information
Locus ID:
Tel5E01G738700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 540904729 | 540908429 | + | Tel5E01G738700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 58,796.54 Da | 55.78 | 59.51 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 388 | 469 | 1.9E-16 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 486 | 517 | 5.2E-8 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 388 | 470 | 1.4E-22 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 141 | - | - |
| Coils | Coil | Coil | 422 | 451 | - | - |
| Coils | Coil | Coil | 394 | 414 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_044399848.1 | INO80 complex subunit B-like [Triticum aestivum] | 0 |
| TrEMBL | A0A453M7V8 | PAPA-1 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology