HalophFGD

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Basic Information
Locus ID: Tel5E01G712800
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 527089236 527090933 + Tel5E01G712800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.27 45,042.05 Da 41.61 94.39 -0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 8 68 2.62E-8 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_040246058.1 uncharacterized protein LOC120965005 [Aegilops tauschii subsp. strangulata] 0
TrEMBL A0A453M4W9 F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_5AG0406410, gene-QOZ80_5BG0454530
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0521620.1, HORVU.MOREX.r3.6HG0621080.1
Poaceae Lolium multiflorum 7 gene-QYE76_041979, gene-QYE76_059304, gene-QYE76_061079 ...
gene-QYE76_061080, gene-QYE76_061081, gene-QYE76_064753, gene-QYE76_064758
Poaceae Paspalum vaginatum 1 gene-BS78_09G028800
Poaceae Puccinellia tenuiflora 5 Pt_Chr0104272, Pt_Chr0105542, Pt_Chr0105579, Pt_Chr0303388 ...
Pt_Chr0403061
Poaceae Thinopyrum elongatum 8 Tel5E01G712100, Tel5E01G712200, Tel5E01G712300 ...
Tel5E01G712400, Tel5E01G712600, Tel5E01G712700, Tel5E01G712800, Tel5E01G713100
Poaceae Triticum dicoccoides 2 gene_TRIDC5AG064740, gene_TRIDC6BG059860
Poaceae Triticum aestivum 25 TraesCS1D02G232500.2, TraesCS2A02G265300.1.cds1 ...
TraesCS2B02G276700.1, TraesCS2D02G258200.1, TraesCS3B02G481700.1, TraesCS5A02G451000.1, TraesCS5A02G451100.1, TraesCS5A02G451200.1, TraesCS5A02G451300.1, TraesCS5B02G459400.1, TraesCS5B02G459500.1, TraesCS5B02G459600.1, TraesCS5B02G459700.1, TraesCS5B02G459800.1.cds1, TraesCS5B02G459900.1, TraesCS5B02G460000.1, TraesCS5B02G460100.1, TraesCS5D02G461000.1, TraesCS5D02G461100.1, TraesCS5D02G461200.1, TraesCS5D02G461300.1, TraesCS5D02G461400.1, TraesCS5D02G461500.1, TraesCS6A02G341000.1, TraesCS6B02G372400.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.