HalophFGD

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Basic Information
Locus ID: Tel5E01G694400
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 517364105 517364320 - Tel5E01G694400
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.77 8,016.33 Da 62.55 99.01 0.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd18186 BTB_POZ_ZBTB_KLHL-like 1 51 1.99727E-6 -
Pfam PF00651 BTB/POZ domain 4 64 9.1E-7 IPR000210
SUPERFAMILY SSF54695 POZ domain 6 65 7.53E-7 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 1 67 7.0E-9 IPR011333
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G01160.1 BTB/POZ/Kelch-associated protein. 0
RefSeq XP_044949702.1 BTB/POZ domain-containing protein POB1-like [Hordeum vulgare subsp. vulgare] 0
Swiss-Prot O04615 BTB/POZ domain-containing protein At4g01160 OS=Arabidopsis thaliana OX=3702 GN=At4g01160 PE=3 SV=1 0
TrEMBL A0A453M392 BTB domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Beta vulgaris 1 BVRB_8g187400
Brassicaceae Brassica nigra 1 BniB08g041430.2N
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-11221
Plantaginaceae Plantago ovata 3 Pov_00028356, Pov_00028402, Pov_00028412
Poaceae Thinopyrum elongatum 5 Tel5E01G694100, Tel5E01G694400, Tel5E01G787700 ...
Tel5E01G787900, Tel5E01G789600
Poaceae Triticum dicoccoides 2 gene_TRIDC2BG063870, gene_TRIDC4AG054000
Poaceae Triticum aestivum 2 TraesCS4A02G362100.2, TraesCS5D02G511000.1
Poaceae Zoysia japonica 1 nbis-gene-35424
Salicaceae Populus euphratica 1 populus_peu34485
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.