halophFGD

Basic Information

Locus ID: Tel5E01G674300

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr5	507458511	507459152	+	Tel5E01G674300

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.85	25,100.93 Da	52.93	96.53	-0.38

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	11	63	3.79E-9	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	1	53	1.1E-5	-
ProSiteProfiles	PS50181	F-box domain profile.	10	62	9.868391	IPR001810

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G05080.1	F-box/RNI-like/FBD-like domains-containing protein.
RefSeq	XP_044399040.1	uncharacterized protein LOC123122766 isoform X1 [Triticum aestivum]
TrEMBL	A0A453LQX7	F-box domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	BH03.1194, BH03.3927
Poaceae	Thinopyrum elongatum	4	Tel5E01G026600, Tel5E01G026700, Tel5E01G026800 ... Tel5E01G674300