HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel5E01G668600
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 503614079 503615496 + Tel5E01G668600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.96 49,901.86 Da 42.30 87.03 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 84 180 2.49E-7 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037431527.1 uncharacterized protein LOC119298115 [Triticum dicoccoides] 0
TrEMBL A0A3B6KRD6 F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.3HG0318930.1.CDS1
Poaceae Lolium multiflorum 8 gene-QYE76_002022, gene-QYE76_002023, gene-QYE76_057913 ...
gene-QYE76_057914, gene-QYE76_057929, gene-QYE76_057930, gene-QYE76_057938, gene-QYE76_057943
Poaceae Oryza sativa 1 LOC_Os10g05500.1
Poaceae Puccinellia tenuiflora 6 Pt_Chr0105279, Pt_Chr0105287, Pt_Chr0105324, Pt_Chr0105325 ...
Pt_Chr0105326, Pt_Chr0107031
Poaceae Sporobolus alterniflorus 2 Chr01G011010, Chr12G025920
Poaceae Thinopyrum elongatum 1 Tel5E01G668600
Poaceae Triticum aestivum 4 TraesCS3B02G528600.1.cds1, TraesCS3D02G477400.1.cds1 ...
TraesCS5A02G426900.1.cds1, TraesCS5B02G428800.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.