HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel5E01G620200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
Chromosome Start End Strand ID
chr5 476100665 476108235 + Tel5E01G620200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.11 145,052.05 Da 50.55 79.73 -0.67
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00225 Kinesin motor domain 35 367 7.8E-113 IPR001752
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 29 401 1.18E-120 IPR027417
Gene3D G3DSA:3.40.850.10 Kinesin motor domain 23 379 1.3E-137 IPR036961
SMART SM00129 kinesin_4 27 375 4.6E-161 IPR001752
ProSiteProfiles PS50067 Kinesin motor domain profile. 29 367 122.944595 IPR001752
ProSitePatterns PS00411 Kinesin motor domain signature. 263 274 - IPR019821
PRINTS PR00380 Kinesin heavy chain signature 231 248 7.0E-41 IPR001752
PRINTS PR00380 Kinesin heavy chain signature 101 122 7.0E-41 IPR001752
PRINTS PR00380 Kinesin heavy chain signature 317 338 7.0E-41 IPR001752
PRINTS PR00380 Kinesin heavy chain signature 264 282 7.0E-41 IPR001752
MobiDBLite mobidb-lite consensus disorder prediction 747 768 - -
Coils Coil Coil 1110 1137 - -
Coils Coil Coil 508 532 - -
Coils Coil Coil 804 838 - -
Coils Coil Coil 381 401 - -
Coils Coil Coil 620 654 - -
Coils Coil Coil 972 992 - -
Coils Coil Coil 1039 1084 - -
Gene Ontology
Biological Process:
GO:0007018 (microtubule-based movement)
Molecular Function:
GO:0003777 (microtubule motor activity) GO:0005524 (ATP binding) GO:0008017 (microtubule binding)
KEGG Pathway
KO Term:
K10400 (kinesin family member 15)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G44050.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein. 0
RefSeq XP_044399145.1 kinesin-like protein KIN-12G [Triticum aestivum] 0
Swiss-Prot Q75LL2 Kinesin-like protein KIN-12G OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12G PE=3 SV=1 0
TrEMBL A0A3B6MWM4 Kinesin motor domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg1050, jg12327, jg28708, jg36061
Aizoaceae Mesembryanthemum crystallinum 3 gene_21585, gene_5744, gene_5745
Amaranthaceae Atriplex hortensis 2 Ah010361, Ah027761
Amaranthaceae Beta vulgaris 2 BVRB_7g171450, BVRB_9g218530
Amaranthaceae Salicornia bigelovii 6 Sbi_jg1474, Sbi_jg26557, Sbi_jg34007, Sbi_jg35083 ...
Sbi_jg39603, Sbi_jg39604
Amaranthaceae Salicornia europaea 2 Seu_jg15082, Seu_jg3268
Amaranthaceae Suaeda aralocaspica 3 GOSA_00003438, GOSA_00019691, GOSA_00019692
Amaranthaceae Suaeda glauca 4 Sgl00036, Sgl05109, Sgl72698, Sgl76237
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000007002, gene:ENSEOMG00000018937 ...
gene:ENSEOMG00000039830, gene:ENSEOMG00000043440, gene:ENSEOMG00000053043
Amaranthaceae Chenopodium quinoa 5 CQ.Regalona.r1.7AG0005140, CQ.Regalona.r1.7AG0005150 ...
CQ.Regalona.r1.7BG0008660, CQ.Regalona.r1.9AG0015780, CQ.Regalona.r1.9BG0000660
Anacardiaceae Pistacia vera 5 pistato.v30055570, pistato.v30113250, pistato.v30187920 ...
pistato.v30232340, pistato.v30287400
Apiaceae Apium graveolens 4 Ag1G02040, Ag5G01775, Ag6G02230, Ag9G00142
Arecaceae Cocos nucifera 4 COCNU_03G000010, COCNU_04G009820, COCNU_04G010440 ...
COCNU_06G017700
Arecaceae Phoenix dactylifera 3 gene-LOC103701143, gene-LOC103707297, gene-LOC103709188
Asparagaceae Asparagus officinalis 3 AsparagusV1_05.1640.V1.1, AsparagusV1_07.1083.V1.1 ...
AsparagusV1_07.3115.V1.1
Asteraceae Flaveria trinervia 4 Ftri14G10302, Ftri15G09275, Ftri16G04182, Ftri17G01101
Brassicaceae Arabidopsis thaliana 3 AT3G17360.1, AT3G19050.1, AT3G44050.1
Brassicaceae Eutrema salsugineum 3 Thhalv10010073m.g.v1.0, Thhalv10019870m.g.v1.0 ...
Thhalv10019874m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp3g15530.v2.2, Sp3g17150.v2.2, Sp5g17250.v2.2
Brassicaceae Brassica nigra 3 BniB01g045320.2N, BniB01g047410.2N, BniB08g056860.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq05G1531, Ceq07G1976, Ceq09G1410
Casuarinaceae Casuarina glauca 3 Cgl05G1530, Cgl07G2172, Cgl09G1502
Cymodoceaceae Cymodocea nodosa 4 gene.Cymno01g00190, gene.Cymno01g15360, gene.Cymno04g06760 ...
gene.Cymno05g06170
Dunaliellaceae Dunaliella salina 8 Dusal.0038s00038.v1.0, Dusal.0040s00027.v1.0 ...
Dusal.0041s00037.v1.0, Dusal.0224s00019.v1.0, Dusal.0225s00005.v1.0, Dusal.0284s00013.v1.0, Dusal.0342s00004.v1.0, Dusal.0699s00003.v1.0
Hydrocharitaceae Thalassia testudinum 3 gene.Thate02g39880, gene.Thate04g14110, gene.Thate06g13200
Malvaceae Hibiscus hamabo Siebold & Zucc. 3 nbisL1-mrna-11921, nbisL1-mrna-444, nbisL1-mrna-5477
Nitrariaceae Nitraria sibirica 4 evm.TU.LG08.41, evm.TU.LG09.520, evm.TU.LG09.521 ...
evm.TU.LG11.1122
Plantaginaceae Plantago ovata 3 Pov_00015724, Pov_00026333, Pov_00035518
Plumbaginaceae Limonium bicolor 4 Lb1G04325, Lb3G17181, Lb3G19277, Lb3G19281
Poaceae Echinochloa crus-galli 11 AH03.3839, AH05.3873, BH01.716, BH03.4124, BH05.3978 ...
BH06.2885, CH01.713, CH03.4399, CH03.4838, CH05.4192, Contig309.73
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_3AG0215980, gene-QOZ80_3BG0261250
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.2HG0120880.1, HORVU.MOREX.r3.5HG0437720.1 ...
HORVU.MOREX.r3.5HG0438440.1, HORVU.MOREX.r3.5HG0510860.1
Poaceae Lolium multiflorum 5 gene-QYE76_000502, gene-QYE76_000517, gene-QYE76_035819 ...
gene-QYE76_039349, gene-QYE76_061813
Poaceae Oryza coarctata 5 Oco05G023700, Oco06G024620, Oco13G013850, Oco14G014660 ...
Oco24G009220
Poaceae Oryza sativa 3 LOC_Os03g53920.1, LOC_Os07g44400.1, LOC_Os12g39980.1
Poaceae Paspalum vaginatum 3 gene-BS78_01G080100, gene-BS78_02G366100 ...
gene-BS78_08G123300
Poaceae Puccinellia tenuiflora 5 Pt_Chr0107185, Pt_Chr0304831, Pt_Chr0704135, Pt_Chr0704142 ...
Pt_Chr0704161
Poaceae Sporobolus alterniflorus 8 Chr04G018200, Chr04G028640, Chr06G018820, Chr07G027600 ...
Chr12G037590, Chr24G013970, Chr24G014160, Chr28G012770
Poaceae Thinopyrum elongatum 5 Tel2E01G301100, Tel5E01G138600, Tel5E01G138700 ...
Tel5E01G141300, Tel5E01G620200
Poaceae Triticum dicoccoides 8 gene_TRIDC2AG018780, gene_TRIDC2BG022610 ...
gene_TRIDC5AG010190, gene_TRIDC5AG010330, gene_TRIDC5AG056840, gene_TRIDC5BG011820, gene_TRIDC5BG012080, gene_TRIDC5BG060980
Poaceae Triticum aestivum 10 TraesCS2A02G149500.1, TraesCS2B02G174600.1 ...
TraesCS2D02G154600.1, TraesCS5A02G067300.1, TraesCS5A02G390000.1, TraesCS5B02G072900.1, TraesCS5B02G074200.1, TraesCS5B02G395000.1, TraesCS5D02G078500.1, TraesCS5D02G399800.1
Poaceae Zea mays 4 Zm00001eb057370_P001, Zm00001eb135060_P001 ...
Zm00001eb210340_P001, Zm00001eb328750_P001
Poaceae Zoysia japonica 3 nbis-gene-15074, nbis-gene-263, nbis-gene-30461
Poaceae Zoysia macrostachya 3 Zma_g26049, Zma_g473, Zma_g6938
Portulacaceae Portulaca oleracea 5 evm.TU.LG02.1872, evm.TU.LG02.428, evm.TU.LG05.2228 ...
evm.TU.LG07.1345, evm.TU.LG08.1886
Posidoniaceae Posidonia oceanica 3 gene.Posoc01g12950, gene.Posoc03g00470, gene.Posoc03g28550
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_12_RagTag.486, evm.TU.Scaffold_1_RagTag.2133 ...
evm.TU.Scaffold_2_RagTag.275, evm.TU.Scaffold_3_RagTag.701
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-1267, nbisL1-mrna-24257, nbisL1-mrna-4922 ...
nbisL1-mrna-5936
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-12899, nbisL1-mrna-16941, nbisL1-mrna-18477
Rhizophoraceae Ceriops zippeliana 6 nbisL1-mrna-19741, nbisL1-mrna-3404, nbisL1-mrna-6384 ...
nbisL1-mrna-6385, nbisL1-mrna-6386, nbisL1-mrna-6387
Rhizophoraceae Kandelia candel 3 evm.TU.utg000016l.189, evm.TU.utg000019l.791 ...
evm.TU.utg000027l.268
Rhizophoraceae Kandelia obovata 3 Maker00012574, Maker00016779, Maker00017901
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-18826, nbisL1-mrna-4749, nbisL1-mrna-5714
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-11966, nbisL1-mrna-13135, nbisL1-mrna-14064 ...
nbisL1-mrna-6109
Salicaceae Populus euphratica 5 populus_peu08519, populus_peu08958, populus_peu08959 ...
populus_peu20736, populus_peu36831
Solanaceae Lycium barbarum 3 gene-LOC132599085, gene-LOC132600674, gene-LOC132626609
Solanaceae Solanum chilense 4 SOLCI002697400, SOLCI003294100, SOLCI004338900 ...
SOLCI004339000
Solanaceae Solanum pennellii 3 gene-LOC107005003, gene-LOC107006540, gene-LOC107007729
Tamaricaceae Reaumuria soongarica 3 MSTRG.11965_chr07_+, STRG.11368_chr02_-, gene_3022
Tamaricaceae Tamarix chinensis 4 TC08G0528, TC08G0529, TC10G0544, TC11G1278
Zosteraceae Zostera marina 3 Zosma03g17300.v3.1, Zosma03g18100.v3.1, Zosma05g33120.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.