Basic Information
Locus ID:
Tel5E01G602200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 467412557 | 467414258 | + | Tel5E01G602200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.41 | 25,503.14 Da | 54.42 | 69.21 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 8 | 219 | 2.6E-61 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 130 | 220 | 2.94E-15 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 128 | 223 | 1.2E-31 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 132 | 231 | 17.415398 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 109 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 95 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_020201529.1 | auxin-responsive protein IAA30 [Aegilops tauschii subsp. strangulata] | 0 |
| Q75GK0 | Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453LR48 | Auxin-responsive protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology