Basic Information
Locus ID:
Tel5E01G600100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Uncharacterised MFS-type transporter YbfB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 465602951 | 465607289 | - | Tel5E01G600100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 52,392.72 Da | 36.24 | 108.85 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00083 | Sugar (and other) transporter | 55 | 216 | 3.4E-30 | IPR005828 |
| Pfam | PF00083 | Sugar (and other) transporter | 336 | 478 | 5.3E-10 | IPR005828 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 7 | 477 | 4.32E-62 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 16 | 479 | 4.6E-78 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 22 | 474 | 35.963413 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 350 | 365 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_037436022.1 | organic cation/carnitine transporter 7-like [Triticum dicoccoides] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LST1 | MFS domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology