Basic Information
Locus ID:
Tel5E01G598600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 464853378 | 464857284 | - | Tel5E01G598600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 44,587.81 Da | 41.38 | 86.12 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00983 | recA | 65 | 388 | 0.0 | IPR013765 |
| Pfam | PF00154 | recA bacterial DNA recombination protein | 68 | 330 | 1.6E-118 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 330 | 387 | 3.53E-18 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 66 | 329 | 8.47E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 89 | 329 | 2.4E-79 | IPR027417 |
| Gene3D | G3DSA:3.30.250.10 | - | 332 | 388 | 3.6E-21 | - |
| SMART | SM00382 | AAA_5 | 117 | 288 | 2.5E-9 | IPR003593 |
| TIGRFAM | TIGR02012 | tigrfam_recA: protein RecA | 65 | 385 | 4.7E-144 | IPR013765 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 96 | 254 | 27.261904 | IPR020588 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 259 | 334 | 28.446081 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 273 | 281 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 187 | 216 | 1.8E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 153 | 182 | 1.8E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 225 | 254 | 1.8E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 305 | 334 | 1.8E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 270 | 298 | 1.8E-77 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 359 | 376 | 1.8E-77 | IPR013765 |
| Hamap | MF_00268 | Protein RecA [recA]. | 66 | 391 | 45.008492 | IPR013765 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79050.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_037443301.1 | DNA repair protein recA homolog 1, chloroplastic-like [Triticum dicoccoides] | 0 |
| Q39199 | DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECA PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6LSS1 | RECA_3 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology