Basic Information
Locus ID:
Tel5E01G597200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 464163550 | 464167225 | + | Tel5E01G597200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 70,026.97 Da | 49.90 | 90.00 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 22 | 124 | 1.06376E-44 | - |
| Pfam | PF00651 | BTB/POZ domain | 30 | 116 | 4.9E-9 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 214 | 469 | 3.5E-92 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 19 | 116 | 2.67E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 17 | 135 | 2.0E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 31 | 127 | 0.0012 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 31 | 99 | 12.639748 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 214 | 493 | 93.328629 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 632 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 608 | - | - |
| Coils | Coil | Coil | 607 | 627 | - | - |
| Coils | Coil | Coil | 536 | 570 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_037443269.1 | BTB/POZ domain-containing protein At1g30440-like [Triticum dicoccoides] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A3B6LSS2 | BTB/POZ domain-containing protein At1g30440-like OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology