Basic Information
Locus ID:
Tel5E01G586500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Mitochondrial protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 459235297 | 459242836 | - | Tel5E01G586500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 109,141.29 Da | 40.88 | 84.40 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 485 | 726 | 7.14064E-43 | - |
| Pfam | PF00069 | Protein kinase domain | 39 | 252 | 7.0E-49 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 680 | 716 | 0.0023 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 635 | 674 | 5.2E-7 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 480 | 727 | 5.0E-52 | IPR036322 |
| SUPERFAMILY | SSF49354 | PapD-like | 802 | 947 | 4.19E-9 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 305 | 1.08E-68 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 325 | 401 | 9.68E-7 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 325 | 464 | 1.0E-7 | IPR013783 |
| Gene3D | G3DSA:2.130.10.10 | - | 473 | 737 | 2.8E-72 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 110 | 8.1E-23 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 803 | 946 | 1.5E-12 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 128 | 322 | 2.3E-52 | - |
| SMART | SM00220 | serkin_6 | 38 | 302 | 3.7E-41 | IPR000719 |
| SMART | SM00320 | WD40_4 | 633 | 674 | 3.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 461 | 501 | 87.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 504 | 543 | 1.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 547 | 585 | 0.026 | IPR001680 |
| SMART | SM00320 | WD40_4 | 589 | 630 | 0.0031 | IPR001680 |
| SMART | SM00320 | WD40_4 | 677 | 716 | 1.7E-6 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 684 | 716 | 11.07656 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 325 | 469 | 9.095208 | IPR000535 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 640 | 677 | 9.467419 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 640 | 683 | 12.246197 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 38 | 332 | 36.852299 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 809 | 941 | 11.368295 | IPR000535 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 684 | 716 | 9.282875 | - |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 44 | 65 | - | IPR017441 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 661 | 675 | - | IPR019775 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 168 | 180 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_044382707.1 | uncharacterized protein LOC123104856 isoform X1 [Triticum aestivum] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6KNW4 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G586400, Tel5E01G586500 |
| Poaceae | Triticum aestivum | 2 | TraesCS5A02G367700.3, TraesCS5D02G376600.2 |